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    OSF - Open-Source Miniature Spectrophotometer Wiki

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    bizniz

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    OSF - Open-Source Miniature Spectrophotometer Wiki

    Uploaded by

    bizniz
    31 views3 pages

    Original Title

    OSF _ Open-Source Miniature Spectrophotometer Wiki

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    © © All Rights Reserved

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    Copyright:

    © All Rights Reserved
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    31 views3 pages

    OSF - Open-Source Miniature Spectrophotometer Wiki

    Uploaded by

    bizniz

    Copyright:

    © All Rights Reserved
    Download as PDF, TXT or read online from Scribd
    Download as pdf or txt
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     Home

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     Menu

      Project Wiki Pages

     Home (/rbfse/wiki/home/)

     View Wiki Version: (Current) Katrīna Laganovska: 2020-03-20 13:56:57+00:00 UTC

    Open-Source Miniature Spectrophotometer


    (OSMS)
    The OSMS software was designed by Katrina Laganovska, University of Latvia, Institute of Solid State Physics
    (www.lum.lv (http://www.lum.lv)).
    If you have any questions, comments or feedback, please contact me at
    [email protected] (mailto:[email protected]). or here

    The complete and updated software


    Short guide to everything:
    The ready-to-use software files can be found in the release section and the source files have been
    uploaded here.
    To use the device without making changes:
    1. Assemble the device
    2. Upload Arduino code to your Arduino microcontroller
    3. Install Android app or run the Python software
    How to measure the absorption spectrum:
    1. Connect to Bluetooth if using app (you'll need to pair your HC-05 module with your phone first)
    2. Measure the baseline (the spectrum of the LED wihtout the sample in)
    3. Insert sample
    4. Choose either "Single" or "Continuous" measurement in Desktop mode or "Capture" in the Android
    app.
    5. Repeat from step 2 for additional samples (however it is recommended to re-measure the baseline
    every once in a while)
    Notes:
    Accumulation and continuous measurements are only possible in Desktop mode
    The STOP button will halt the continuos process only after finishing the running measurement.
    When changing accumulation time, make sure to measure the baseline again.
    In order to save continuos measurements as a series of files, enable lines 292 and 293 and disable
    295.

    For users who want to customize the software/device:


    See the commented Arduino code. Simple test functions have been left in the code (turning the built-in
    LED of the Arduino on and off for the purpose of troubleshooting).
    LED:
    In the final version the LED turns on automatically whenever the device is turned on, however, for
    testing purposes, that can be changed in the Arduino code. This allows to measure dark noise or just
    check if the commands are going through. Additionally a block of code for automatic LED brightness
    calibration has been left in, if the user finds it would suit his needs better (however, it slows down the
    process considerably).
    Baseline spectrum and the spectrum (when a sample is inserted) are saved automatically when used in
    Desktop mode (baseline.txt and spectrum.txt respectively) and can be viewed for calibration purposes
    (exposure time/LED brightness setting combination).

    This website relies on cookies to help provide a better user


    experience. By clicking Accept or continuing to use the site, you
    agree. For more information,
    see our Privacy Policy
    (https://github.com/CenterForOpenScience/cos.io/blob/master/PRIVA Accept
    CY_POLICY.md) and information on cookie use
    (https://github.com/CenterForOpenScience/cos.io/blob/master/PRIVA
    CY_POLICY.md#7-types-of-information-we-collect).

    Copyright © 2011-2021
    Center for Open Science
    (https://cos.io) |
    Terms of Use
    (https://github.com/CenterForOpenScience/centerforopenscience.org/blob/master/TERMS_OF_USE.md) |
    Privacy Policy
    (https://github.com/CenterForOpenScience/centerforopenscience.org/blob/master/PRIVACY_POLICY.md) |
    Status
    (https://status.cos.io/) |
    API
    (https://developer.osf.io/)
    TOP Guidelines
    (http://cos.io/top/) |
    Reproducibility Project: Psychology
    (https://osf.io/ezcuj/wiki/home/) |
    Reproducibility Project: Cancer Biology
    (https://osf.io/collections/rpcb/discover)

     
     (http://twitter.com/OSFramework)  (https://www.facebook.com/CenterForOpenScience/) 
    (https://groups.google.com/forum/#!forum/openscienceframework) 
    (https://www.github.com/centerforopenscience)

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