FMRI
FMRI
FMRI
Further Readings
• FMRIBC, University of oxford Ed: FMRI: Int.
• Functional MRI: An Introduction to Methods, Peter Jezzard et all. 1-3 CHL.
• FMRI: Basic and Clinical Applications, Stephen Ulmer et all.
• MRI From A to Z: A Definate Guide for Medical Professionals, Gary Liney
• Youtube has nice illustrative videos
• http://www.fmrib.ox.ac.uk/education/fmri/introduction-to-fmri/
Introduction
• A technique for measuring brain activity.
• How? Detects the changes in blood
oxygenation and flow that occur in response
to neural activity
Advantages & Disadvantages
• Pros:
1. Can see activation in addition to high res brain
structures
2. Scanners can be fitted to present stimuli
3. Higher spatial and temporal resolution than PET
• Cons:
1. Cannot trace neurotransmission like PET
2. Blood flow is, again, only an indirect correlate of
brain activity
MRI
• MRI houses a very powerful electro-magnet.
• Field strength of 3 teslas (T)
• The magnetic field influence atomic nuclei
• The stronger the field the greater the degree of alignment.
• When pointing in the same direction, the tiny magnetic signals from
individual nuclei add up coherently resulting in a signal that is large
enough to measure.
• In FMRI it is the magnetic signal from hydrogen nuclei in water (H 2O) that
is detected
• The key to MRI is that the signal from hydrogen nuclei varies in strength
depending on the surroundings. This provides a means of discriminating
between grey matter, white matter and cerebral spinal fluid in structural
images of the brain.
Measuring FMRI
• Haemoglobin has oxygen, and increase neuronal activity
increases demand for oxygen rendering in local increase of
blood flow near the area of activity.
• Haemoglobin is diamagnetic when oxygenated but
paramagnetic when deoxygenated.
• Difference in magnetic properties leads to differences in MR
signal of blood depending on the degree of oxygenation.
• Since blood oxygenation varies according to the levels of
neural activity these differences can be used to detect brain
activity [blood oxygenation level dependent (BOLD) imaging]
One point to note is the direction of oxygenation change with increased
activity. You might expect blood oxygenation to decrease with activation,
but the reality is a little more complex.
There is a momentary decrease in blood oxygenation immediately after
neural activity increases, known as the “initial dip” in the haemodynamic
response. This is followed by a period where the blood flow increases, not
just to a level where oxygen demand is met, but overcompensating for the
increased demand. This means the blood oxygenation actually increases
following neural activation. The blood flow peaks after around 6 seconds
and then falls back to baseline, often accompanied by a “post-stimulus
undershoot”.