Congratulations to NOETIK on the release of OCTO-VirtualCell, the first multimodal foundation model for predicting gene expression at single-cell resolution in intact patient tissue. Incredible work from the team - Ron Alfa, Jacob Rinaldi, Lacey Padrón, Daniel Bear, Yubin Xie, and everyone else involved. Check out the technical report and interactive tool with the links below. The future is #spatial and #multiscale.
Today we're announcing a breakthrough AI model: OCTO-VirtualCell and the Celleporter demo in a new Technical Report from the NOETIK AI Research Team. OCTO-vc is a multi-scale, multimodal transformer trained to predict gene expression for a virtual cell in cellular contexts within a patient tissue sample. We trained OCTO-vc on 40 million cells of spatial transcriptomics data from over 1,000 unique patient samples, all generated in-house at NOETIK. This is one of the largest unified datasets of its kind. The depth of patient data allows OCTO-vc to learn patient-specific biological contexts for drug discovery. Using OCTO-vc simulations, we ask biological questions by placing virtual cells (such as immune cells) within any context of a patient sample, or across large cohorts of patient samples. The model infers context-dependent changes in cell biology from the underlying spatial transcriptomics data. We use this approach to discover T cell biology of immune checkpoint resistant patients, and screen for new drug targets. OCTO-vc is a general interface for spatial biology to enable foundational biological research and unlock drug discovery capabilities directly in patient clinical samples, from any context of healthy or disease biology. See the Technical Report: https://lnkd.in/gjPkArKZ Press Release: https://lnkd.in/gMZiUcGS