Mastering Python

Table of Contents

Mastering Python

Credits

About the Author

About the Reviewers

www.PacktPub.com

eBooks, discount offers, and more

Why subscribe?

Preface

What this book covers

What you need for this book

Who this book is for

Conventions

Reader feedback

Customer support

Downloading the example code

Errata

Piracy

Questions

1. Getting Started – One Environment per Project

Creating a virtual Python environment using venv

Creating your first venv

venv arguments

Differences between virtualenv and venv

Bootstrapping pip using ensurepip

ensurepip usage

Manual pip install

Installing C/C++ packages

Debian and Ubuntu

Red Hat, CentOS, and Fedora

OS X

Windows

Summary

2. Pythonic Syntax, Common Pitfalls, and Style Guide

Code style – or what is Pythonic code?

Formatting strings – printf-style or str.format?

PEP20, the Zen of Python

Beautiful is better than ugly

Explicit is better than implicit

Simple is better than complex

Flat is better than nested

Sparse is better than dense

Readability counts

Practicality beats purity

Errors should never pass silently

In the face of ambiguity, refuse the temptation to guess

One obvious way to do it

Now is better than never

Hard to explain, easy to explain

Namespaces are one honking great idea

Conclusion

Explaining PEP8

Duck typing

Differences between value and identity comparisons

Loops

Maximum line length

Verifying code quality, pep8, pyflakes, and more

flake8

Pep8

pyflakes

McCabe

flake8

Pylint

Common pitfalls

Scope matters!

Function arguments

Class properties

Modifying variables in the global scope

Overwriting and/or creating extra built-ins

Modifying while iterating

Catching exceptions – differences between Python 2 and 3

Late binding – be careful with closures

Circular imports

Import collisions

Summary

3. Containers and Collections – Storing Data the Right Way

Time complexity – the big O notation

Core collections

list – a mutable list of items

dict – unsorted but a fast map of items

set – like a dict without values

tuple – the immutable list

Advanced collections

ChainMap – the list of dictionaries

counter – keeping track of the most occurring elements

deque – the double ended queue

defaultdict – dictionary with a default value

namedtuple – tuples with field names

enum – a group of constants

OrderedDict – a dictionary where the insertion order matters

heapq – the ordered list

bisect – the sorted list

Summary

4. Functional Programming – Readability Versus Brevity

Functional programming

list comprehensions

dict comprehensions

set comprehensions

lambda functions

The Y combinator

functools

partial – no need to repeat all arguments every time

reduce – combining pairs into a single result

Implementing a factorial function

Processing trees

itertools

accumulate – reduce with intermediate results

chain – combining multiple results

combinations – combinatorics in Python

permutations – combinations where the order matters

compress – selecting items using a list of Booleans

dropwhile/takewhile – selecting items using a function

count – infinite range with decimal steps

groupby – grouping your sorted iterable

islice – slicing any iterable

Summary

5. Decorators – Enabling Code Reuse by Decorating

Decorating functions

Why functools.wraps is important

How are decorators useful?

Memoization using decorators

Decorators with (optional) arguments

Creating decorators using classes

Decorating class functions

Skipping the instance – classmethod and staticmethod

Properties – smart descriptor usage

Decorating classes

Singletons – classes with a single instance

Total ordering – sortable classes the easy way

Useful decorators

Single dispatch – polymorphism in Python

Contextmanager, with statements made easy

Validation, type checks, and conversions

Useless warnings – how to ignore them

Summary

6. Generators and Coroutines – Infinity, One Step at a Time

What are generators?

Advantages and disadvantages of generators

Pipelines – an effective use of generators

tee – using an output multiple times

Generating from generators

Context managers

Coroutines

A basic example

Priming

Closing and throwing exceptions

Bidirectional pipelines

Using the state

Summary

7. Async IO – Multithreading without Threads

Introducing the asyncio library

The async and await statements

Python 3.4

Python 3.5

Choosing between the 3.4 and 3.5 syntax

A simple example of single-threaded parallel processing

Concepts of asyncio

Futures and tasks

Event loops

Event loop implementations

Event loop policies

Event loop usage

Processes

Asynchronous servers and clients

Basic echo server

Summary

8. Metaclasses – Making Classes (Not Instances) Smarter

Dynamically creating classes

A basic metaclass

Arguments to metaclasses

Accessing metaclass attributes through classes

Abstract classes using collections.abc

Internal workings of the abstract classes

Custom type checks

Using abc.ABC before Python 3.4

Automatically registering a plugin system

Importing plugins on-demand

Importing plugins through configuration

Importing plugins through the file system

Order of operations when instantiating classes

Finding the metaclass

Preparing the namespace

Executing the class body

Creating the class object (not instance)

Executing the class decorators

Creating the class instance

Example

Storing class attributes in definition order

The classic solution without metaclasses

Using metaclasses to get a sorted namespace

Summary

9. Documentation – How to Use Sphinx and reStructuredText

The reStructuredText syntax

Getting started with reStructuredText

Inline markup

Headers

Lists

Enumerated list

Bulleted list

Option list

Definition list

Nested lists

Links, references, and labels

Images

Substitutions

Blocks, code, math, comments, and quotes

Conclusion

The Sphinx documentation generator

Getting started with Sphinx

Using sphinx-quickstart

Using sphinx-apidoc

Sphinx directives

The table of contents tree directive (toctree)

Autodoc, documenting Python modules, classes, and functions

Sphinx roles

Documenting code

Documenting a class with the Sphinx style

Documenting a class with the Google style

Documenting a class with the NumPy style

Which style to choose

Summary

10. Testing and Logging – Preparing for Bugs

Using examples as tests with doctest

A simple doctest example

Writing doctests

Testing with pure documentation

The doctest flags

True and False versus 1 and 0

Normalizing whitespace

Ellipsis

Doctest quirks

Testing dictionaries

Testing floating-point numbers

Times and durations

Testing with py.test

The difference between the unittest and py.test output

The difference between unittest and py.test tests

Simplifying assertions

Parameterizing tests

Automatic arguments using fixtures

Cache

Custom fixtures

Print statements and logging

Plugins

pytest-cov

pytest-pep8 and pytest-flakes

Configuring plugins

Mock objects

Using unittest.mock

Using py.test monkeypatch

Logging

Configuration

Basic logging configuration

Dictionary configuration

JSON configuration

Ini file configuration

The network configuration

Logger

Usage

Summary

11. Debugging – Solving the Bugs

Non-interactive debugging

Inspecting your script using trace

Debugging using logging

Showing call stack without exceptions

Debugging asyncio

Handling crashes using faulthandler

Interactive debugging

Console on demand

Debugging using pdb

Breakpoints

Catching exceptions

Commands

Debugging using ipdb

Other debuggers

Debugging services

Summary

12. Performance – Tracking and Reducing Your Memory and CPU Usage

What is performance?

Timeit – comparing code snippet performance

cProfile – finding the slowest components

First profiling run

Calibrating your profiler

Selective profiling using decorators

Using profile statistics

Line profiler

Improving performance

Using the right algorithm

Global interpreter lock

Try versus if

Lists versus generators

String concatenation

Addition versus generators

Map versus generators and list comprehensions

Caching

Lazy imports

Using optimized libraries

Just-in-time compiling

Converting parts of your code to C

Memory usage

Tracemalloc

Memory profiler

Memory leaks

Reducing memory usage

Generators versus lists

Recreating collections versus removing items

Using slots

Performance monitoring

Summary

13. Multiprocessing – When a Single CPU Core Is Not Enough

Multithreading versus multiprocessing

Hyper-threading versus physical CPU cores

Creating a pool of workers

Sharing data between processes

Remote processes

Distributed processing using multiprocessing

Distributed processing using IPyparallel

ipython_config.py

ipython_kernel_config.py

ipcontroller_config.py

ipengine_config.py

ipcluster_config.py

Summary

14. Extensions in C/C++, System Calls, and C/C++ Libraries

Introduction

Do you need C/C++ modules?

Windows

OS X

Linux/Unix

Calling C/C++ with ctypes

Platform-specific libraries

Windows

Linux/Unix

OS X

Making it easy

Calling functions and native types

Complex data structures

Arrays

Gotchas with memory management

CFFI

Complex data structures

Arrays

ABI or API?

CFFI or ctypes?

Native C/C++ extensions

A basic example

C is not Python – size matters

The example explained

static

PyObject*

Parsing arguments

C is not Python – errors are silent or lethal

Calling Python from C – handling complex types

Summary

15. Packaging – Creating Your Own Libraries or Applications

Installing packages

Setup parameters

Packages

Entry points

Creating global commands

Custom setup.py commands

Package data

Testing packages

Unittest

py.test

Nosetests

C/C++ extensions

Regular extensions

Cython extensions

Wheels – the new eggs

Distributing to the Python Package Index

Summary

Index

Mastering Python

Mastering Python

Copyright © 2016 Packt Publishing

All rights reserved. No part of this book may be reproduced, stored in a retrieval system, or transmitted in any form or by any means, without the prior written permission of the publisher, except in the case of brief quotations embedded in critical articles or reviews.

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First published: April 2016

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Published by Packt Publishing Ltd.

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Credits

Author

Rick van Hattem

Reviewers

Randall Degges

Dave de Fijter

I. de Hoogt

Commissioning Editor

Sarah Crofton

Acquisition Editor

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Content Development Editor

Arun Nadar

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Cover Work

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About the Author

Rick van Hattem is an experienced programmer, entrepreneur, and software/database architect with over 20 years of programming experience, including 15 with Python. Additionally, he has a lot of experience with high-performance architectures featuring large amounts of concurrent users and/or data.

Rick has founded several start-ups and has done consulting for many companies, including a few Y Combinator start-ups and several large companies. One of the startups he founded, Fashiolista.com, is one of the largest social networks for fashion in the world, featuring millions of users and the performance challenges to accompany those.

Rick was one of the reviewers on the book PostgreSQL Server Programming, Packt Publishing.

Thanks to my family, in particular Marloes, who supported me every step of the way; and my mother and sister, who have always been there for me.

About the Reviewers

Randall Degges is a happy programmer, speaker, author, and amateur bodybuilder living in California.

Growing up in Los Angeles, he was intensely interested in building command-line programs and writing quality software. His love of programming eventually propelled him into a successful career in software development.

Randall has been a life-long open source developer and has contributed to hundreds of popular projects in Python, Node.js, and Go. He's also the author of several popular libraries, which you can find on his public GitHub account at https://github.com/rdegges.

At 23, he cofounded an extremely popular API service in the telephony industry: OpenCNAM (https://www.opencnam.com). At 25, he joined Stormpath (https://stormpath.com) as the head of developer evangelism, whereby he writes open source security libraries full time and travels the world giving technical talks about building secure software.

In his free time, Randall writes and edits technical books, runs a security podcast called Stormcast (https://www.stormca.st), posts blogs on his personal website (https://www.rdegges.com), and tries to spend time with his high-school sweetheart, Samantha.

Dave de Fijter is a Python developer from the Netherlands. He always knew he would end up doing something with computers. At a young age, he went to the library to read books about them even though he had no computer at that time. This obsession never really ended. In 2001, aged 14, he started his first part-time job, creating dynamic websites in PHP for a local web development company, and there he found his calling.

In 2007, he finished his bachelor's degree in ICT while already working full time as a PHP developer for over a year. In 2008, he switched from PHP to Python and Django for web development and loved this new technology stack so much that he never looked back.

After working as a Python developer for various start-ups and established companies, Dave used this experience to start his own business called Indentity (https://indentity.nl) in 2010, focusing on Python/Django development and advice. Up until now, he runs this company and mainly spends his time helping out start-ups with designing and building technologically advanced web applications from the ground up as an interim CTO/technical cofounder.

I. de Hoogt, with some basic experience wrought from university assignments in the field of modeling of multi-phase flows, got himself started in software development. His main experience in programming in Python stems from an internship at a company dealing in 3D printing software, where a package resulting in optimized object orientation and guaranteed mathematical mesh validity was created.

Other projects that he's been involved with have dealt with control systems such as self-parking cars, multi-legged robots, and quadcopters, but his current job is in the field of data analysis.

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Preface

Python is a language that is easy to learn and both powerful and convenient from the start. Mastering Python, however, is a completely different question.

Every programming problem you will encounter has at least several possible solutions and/or paradigms to apply within the vast possibilities of Python. This book will not only illustrate a range of different and new techniques but also explain where and when a method should be applied.

This book is not a beginner's guide to Python 3. It is a book that can teach you about the more advanced techniques possible within Python. Specifically targeting Python 3.5 and up, it also demonstrates several Python 3.5-only features such as async def and await statements.

As a Python programmer with many years of experience, I will attempt to rationalize the choices made in this book with relevant background information. These rationalizations are in no way strict guidelines, however. Several of these cases boil down to personal style in the end. Just know that they stem from experience and are, in many cases, the solutions recommended by the Python community.

Some of the references in this book might not be obvious to you if you are not a fan of Monty Python. This book extensively uses spam and eggs instead of foo and bar in code samples. To provide some background information, I recommend watching the Spam sketch by Monty Python. It is positively silly!

What this book covers

Chapter 1, Getting Started – One Environment per Project, introduces virtual Python environments using virtualenv or venv to isolate the packages in your Python projects.

Chapter 2, Pythonic Syntax, Common Pitfalls, and Style Guide, explains what Pythonic code is and how to write code that is Pythonic and adheres to the Python philosophy.

Chapter 3, Containers and Collections – Storing Data the Right Way, is where we use the many containers and collections bundled with Python to create code that is fast and readable.

Chapter 4, Functional Programming – Readability Versus Brevity, covers functional programming techniques such as list/dict/set comprehensions and lambda statements that are available in Python. Additionally, it illustrates their similarities with the mathematical principles involved.

Chapter 5, Decorators – Enabling Code Reuse by Decorating, explains not only how to create your own function/class decorators, but also how internal decorators such as property, staticmethod, and classmethod work.

Chapter 6, Generators and Coroutines – Infinity, One Step at a Time, shows how generators and coroutines can be used to lazily evaluate structures of infinite size.

Chapter 7, Async IO – Multithreading without Threads, demonstrates the usage of asynchronous functions using async def and await so that external resources no longer stall your Python processes.

Chapter 8, Metaclasses – Making Classes (Not Instances) Smarter, goes deeper into the creation of classes and how class behavior can be completely modified.

Chapter 9, Documentation – How to Use Sphinx and reStructuredText, shows how you can make Sphinx automatically document your code with very little effort. Additionally, it shows how the Napoleon syntax can be used to document function arguments in a way that is legible both in the code and the documentation.

Chapter 10, Testing and Logging – Preparing for Bugs, explains how code can be tested and how logging can be added to enable easy debugging in case bugs occur at a later time.

Chapter 11, Debugging – Solving the Bugs, demonstrates several methods of hunting down bugs with the use of tracing, logging, and interactive debugging.

Chapter 12, Performance – Tracking and Reducing Your Memory and CPU Usage, shows several methods of measuring and improving CPU and memory usage.

Chapter 13, Multiprocessing – When a Single CPU Core Is Not Enough, illustrates that the multiprocessing library can be used to execute your code, not just on multiple processors but even on multiple machines.

Chapter 14, Extensions in C/C++, System Calls, and C/C++ Libraries, covers the calling of C/C++ functions for both interoperability and performance using Ctypes, CFFI, and native C/C++.

Chapter 15, Packaging – Creating Your Own Libraries or Applications, demonstrates the usage of setuptools and setup.py to build and deploy packages on the Python Package Index (PyPI).

What you need for this book

The only hard requirement for this book is a Python interpreter. A Python 3.5 or newer interpreter is recommended, but many of the code examples will function in older Python versions, such as 2.7, with a simple from __future__ import print_statement added at the top of the file.

Additionally, Chapter 14, Extensions in C/C++, System Calls, and C/C++ Libraries requires a C/C++ compiler, such as GCC, Visual Studio, or XCode. A Linux machine is by far the easiest to execute the C/C++ examples, but these should function on Windows and OS X machines without too much effort as well.

Who this book is for

If you are beyond the absolute Python beginner level, then this book is for you. Even if you are already an expert Python programmer, I guarantee that you will find some useful techniques and insights in this book.

At the very least, it will allow Python 2 programmers to learn a lot more about the new features introduced in Python 3, and specifically Python 3.5.

Basic proficiency in Python is required as the installation of Python interpreters and the basic Python syntax are not covered.

Conventions

In this book, you will find a number of text styles that distinguish between different kinds of information. Here are some examples of these styles and an explanation of their meaning.

Code words in text, database table names, folder names, filenames, file extensions, pathnames, dummy URLs, user input, and Twitter handles are shown as follows: It should be noted that the type() function has another use as well.

A block of code is set as follows:

import abc

import importlib

class Plugins(abc.ABCMeta):

    plugins = dict()

    def __new__(metaclass, name, bases, namespace):

        cls = abc.ABCMeta.__new__(

            metaclass, name, bases, namespace)

Any command-line input or output is written as follows where the >>> indicate the Python console and the # indicates a regular Linux/Unix shell:

>>> class Spam(object): …    eggs = 'my eggs'

>>> Spam = type('Spam', (object,), dict(eggs='my eggs'))

Note

Warnings or important notes appear in a box like this.

Tip

Tips and tricks appear like this.

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Chapter 1. Getting Started – One Environment per Project

There is one aspect of the Python philosophy that always has been, and always will be, the most important in the entire language—readability, or Pythonic code. This book will help you master writing Python the way it was meant to be: readable, beautiful, explicit, and as simple as possible. In short, it will be Pythonic code. That is not to say that complicated subjects will not be covered. Naturally, they will, but whenever the philosophy of Python is at stake, you will be warned when and where the technique is justified.

Most of the code within this book will function on both Python 2 and Python 3, but the main target is Python 3. There are three reasons for doing this:

Python 3 was released in 2008, which is a very long time in the rapidly changing software world. It's not a new thing anymore, it's stable, it's usable, and, most importantly, it's the future.

Development for Python 2 effectively stopped in 2009. Certain features have been backported from Python 3 to Python 2, but any new development will be for Python 3 first.

Python 3 has become mature. While I have to admit that Python 3.2 and older versions still had a few small issues that made it hard to write code that functions on both Python 2 and 3, Python 3.3 did improve greatly in that aspect, and I consider it mature. This is evidenced by the marginally modified syntax in Python 3.4 and 3.5 and a lot of very useful features, which are covered in this book.

To summarize, Python 3 is an improvement over Python 2. I have been a skeptic for a very long time myself, but I do not see any reason not to use Python 3 for new projects, and even porting existing projects to Python 3 is generally possible with only minor changes. With cool new features such as async with in Python 3.5, you will want to upgrade just to try it.

This first chapter will show you how to properly set up an environment, create a new isolated environment, and make sure you get similar results when running the same code on different machines. Most Python programmers are already using virtualenv to create virtual Python environments, but the venv command, introduced in Python 3.3, is a very nice alternative. It is essentially a clone of the virtualenv package but is slightly simpler and bundled with Python. While its usage is mostly analogous to virtualenv, there are a few changes that are interesting to know.

Secondly, we will discuss the pip command. The pip command is automatically installed when using venv through the ensurepip package, a package introduced in Python 3.4. This package automatically bootstraps pip into an existing Python library while maintaining independent versions of Python and pip. Before Python 3.4, venv came without pip and had to be installed manually.

Finally, we will discuss how packages created with distutils can be installed. While pure Python packages are generally easy to install, it can get challenging when C modules are involved.

In this chapter, the following topics are covered:

Creating a virtual Python environment using venv

Bootstrapping pip using ensurepip

Installing packages based on distutils (C/C++) with pip

Creating a virtual Python environment using venv

Most Python programmers are already be familiar with venv or virtualenv, but even if you're not, it's never too late to start using it. The venv module is designed to isolate your Python environments so that you can install packages specific to your current project without polluting your global namespace. For example, having a filename such as sys.py in your current directory can seriously break your code if you expect to have the standard Python sys library—your local sys libraries will be imported before the global one, effectively hiding the system library. In addition, because the packages are installed locally, you don't need system (root/administrator) access to install them.

The result is that you can make sure you have exactly the same version of a package on both your local development machine and production machines without interfering with other packages. For example, there are many Django packages around that require specific versions of the Django project. Using venv, you can easily install Django 1.4 for project A and Django 1.8 for project B without them ever knowing that there are different versions installed in other environments. By default, the environments are even configured in such a way that the global packages are not visible. The benefit of this is that to get an exact list of all installed packages within the environment, simply a pip freeze will suffice. The downside is that some of the heavier packages (for example, numpy) will have to be installed in every separate environment. Needless to say, which choice is the best for your project depends on the project. For most projects, I would keep the default setting of not having the global packages, but when messing around with projects that have lots of C/C++ extensions, it would be convenient to simply enable the global site packages. The reason is simple; if you do not have a compiler available, installing the package locally can be difficult, while the global install has an executable for Windows or an installable package for Linux/Unix available.

Note

The venv module (https://docs.python.org/3/library/venv.html) can be seen as a slightly simplified version of the virtualenv tool (https://virtualenv.pypa.io/), which has been bundled with Python since version 3.3 (refer to PEP 0405 -- Python Virtual Environments: https://www.python.org/dev/peps/pep-0405/).

The virtualenv package can generally be used as a drop-in replacement for venv, which is especially relevant for older Python versions (below 3.3) that do not come bundled with venv.

Creating your first venv

Creating an environment is quite easy. The basic command comes down to pyvenv PATH_TO_THE_NEW_VIRTUAL_ENVIRONMENT, so let's give it a try. Note that this command works on Linux, Unix, and Mac; the Windows command will follow shortly:

# pyvenv test_venv # . ./test_venv/bin/activate (test_venv) #

Note

Some Ubuntu releases (notably 14.04 LTS) maim the Python installation by not including the full pyvenv package with ensurepip. The standard workaround is to call pyvenv --without-pip test_env, which requires a manual pip installation through the get_pip.py file available on the pip home page.

This creates an environment called test_venv, and the second line activates the environment.

On Windows, everything is slightly different but similar overall. By default, the pyvenv command won't be in your PATH, so running the command is slightly different. The three options are as follows:

Add the Python\Tools\Scripts\ directory to your PATH

Run the module:

python -m venv test_venv

Run the script directly:

python Python\Tools\Scripts\pyvenv.py test_venv

For convenience, I would recommend that you add the Scripts directory to your PATH anyhow, since many other applications/scripts (such as pip) will be installed there as well.

Here is the full example for Windows:

C:\envs>python -m venv test_venv C:\envs>test_venv\Scripts\activate.bat (test_venv) C:\envs>

Tip

When using Windows PowerShell, the environment can be activated by using test_venv\Scripts\Activate.ps1 instead. Note that you really do need backslashes here.

venv arguments

So far, we have just created a plain and regular venv, but there are a few, really useful flags for customizing your venv specifically to your needs.

First, let's look at the venv help: